Basic Information
Locus ID:
Dusal.1151s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
thiol-dependent ubiquitin-specific protease activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1151 | 762 | 24129 | + | Dusal.1151s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 74,774.50 Da | 47.65 | 83.29 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 378 | 590 | 2.22546E-73 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 378 | 412 | 2.8E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 458 | 496 | 1.9E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 500 | 538 | 4.3E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 416 | 454 | 8.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 542 | 580 | 3.9E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 378 | 592 | 1.46E-72 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 503 | 639 | 3.6E-33 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 363 | 425 | 5.8E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 426 | 502 | 9.3E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 375 | 412 | 0.0016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 499 | 538 | 1.1E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 541 | 580 | 5.9E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 457 | 496 | 1.6E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 415 | 454 | 3.9E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 464 | 500 | 13.026491 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 422 | 463 | 16.557146 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 548 | 589 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 506 | 542 | 12.815584 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 382 | 421 | 14.986489 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 422 | 458 | 12.921038 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 506 | 547 | 16.423473 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 464 | 505 | 16.690819 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 548 | 585 | 11.602863 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 382 | 416 | 11.681953 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 483 | 497 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 399 | 413 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 525 | 539 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 441 | 455 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 483 | 497 | 8.5E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 525 | 539 | 8.5E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 399 | 413 | 8.5E-9 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042921878.1 | uncharacterized protein CHLRE_08g364000v5 [Chlamydomonas reinhardtii] | 0 |
| Q12417 | Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP46 PE=1 SV=1 | 0 | |
| TrEMBL | A0A699YZT4 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Haematococcus lacustris OX=44745 GN=HaLaN_08210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |