Basic Information
Locus ID:
Dusal.1111s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
dynein heavy chain binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1111 | 30577 | 65620 | - | Dusal.1111s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 98,347.38 Da | 46.01 | 67.23 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 825 | 863 | 0.056 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 782 | 819 | 0.039 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 556 | 910 | 3.16E-41 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 741 | 928 | 1.1E-29 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 549 | 707 | 6.3E-14 | IPR015943 |
| SMART | SM00320 | WD40_4 | 780 | 820 | 4.0E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 572 | 611 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 621 | 663 | 14.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 823 | 863 | 2.1E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 868 | 906 | 3.3 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 787 | 820 | 10.007177 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 830 | 865 | 9.271977 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 738 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 402 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_001696921.1 | uncharacterized protein CHLRE_12g520950v5 [Chlamydomonas reinhardtii] | 0 |
| F1QHZ6 | Dynein axonemal intermediate chain 4 OS=Danio rerio OX=7955 GN=dnai4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S3R179 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS14564 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0255s00015.v1.0, Dusal.1111s00003.v1.0 |