Basic Information
Locus ID:
Dusal.1106s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1106 | 32384 | 37486 | - | Dusal.1106s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 25,729.61 Da | 37.67 | 101.84 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04053 | Coatomer WD associated region | 3 | 193 | 1.6E-69 | IPR006692 |
| Gene3D | G3DSA:1.25.40.470 | - | 65 | 228 | 1.8E-63 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21390.1 | Coatomer, alpha subunit. | 0 |
| RefSeq | XP_002957821.1 | hypothetical protein VOLCADRAFT_77684 [Volvox carteri f. nagariensis] | 0 |
| Q9SJT9 | Coatomer subunit alpha-2 OS=Arabidopsis thaliana OX=3702 GN=At2g21390 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S3VHQ4 | Coatomer subunit alpha OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS1389 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology