Basic Information
Locus ID:
Dusal.1069s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold1069 | 17283 | 37141 | + | Dusal.1069s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 55,344.79 Da | 66.85 | 82.47 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 459 | 495 | 8.7E-7 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 225 | 277 | 2.2E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 62 | 99 | 7.3E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 59 | 495 | 1.2E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 36 | 127 | 1.9E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 428 | 500 | 5.3E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 184 | 418 | 3.5E-38 | IPR015943 |
| SMART | SM00320 | WD40_4 | 257 | 296 | 5.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 338 | 376 | 0.23 | IPR001680 |
| SMART | SM00320 | WD40_4 | 412 | 453 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 216 | 254 | 1.7E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 60 | 99 | 9.5E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 298 | 336 | 6.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 456 | 496 | 3.9E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 264 | 298 | 8.603614 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 67 | 101 | 11.022865 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 67 | 108 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 463 | 495 | 13.950525 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 223 | 259 | 9.124694 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 223 | 263 | 12.346452 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 463 | 495 | 11.550137 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 211 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G43920.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_005646513.1 | WD40 repeat-like protein [Coccomyxa subellipsoidea C-169] | 0 |
| Q9FND4 | WD repeat-containing protein WDS homolog OS=Arabidopsis thaliana OX=3702 GN=WDS PE=1 SV=1 | 0 | |
| TrEMBL | A0A250XDY4 | CTLH domain-containing protein OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g8716.t1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology