Basic Information
Locus ID:
Dusal.0867s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold867 | 48294 | 59046 | + | Dusal.0867s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 27,114.32 Da | 33.88 | 81.74 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF103025 | Folate-binding domain | 5 | 111 | 1.37E-19 | - |
| SUPERFAMILY | SSF101790 | Aminomethyltransferase beta-barrel domain | 114 | 177 | 5.56E-5 | IPR029043 |
| Gene3D | G3DSA:3.30.1360.120 | Probable tRNA modification gtpase trme; domain 1 | 48 | 188 | 1.8E-34 | IPR027266 |
| TIGRFAM | TIGR03317 | ygfZ_signature: folate-binding protein YgfZ | 61 | 123 | 2.6E-19 | IPR017703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 223 | - | - |
| Coils | Coil | Coil | 205 | 247 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60990.1 | Glycine cleavage T-protein family. | 0 |
| RefSeq | XP_013906100.1 | aminomethyltransferase [Monoraphidium neglectum] | 0 |
| Q681Y3 | Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g60990 PE=1 SV=1 | 0 | |
| TrEMBL | A0A699YSD6 | Aminomethyltransferase OS=Haematococcus lacustris OX=44745 GN=HaLaN_08184 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1280 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30064260 |
| Apiaceae | Apium graveolens | 1 | Ag6G01857 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1775.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri7G24419 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G60990.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10023478m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g03530.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB02g075200.2N, BniB06g024310.2N, BniB07g046940.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G0171 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0203 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0867s00003.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.743 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G06246, Lb4G23835, Lb8G36509 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.763 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-7348 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17671 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5772 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000012l.485 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011484 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8319 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-873, nbisL1-mrna-874 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132598691 |
| Solanaceae | Solanum chilense | 1 | SOLCI002907900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008309 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.30123_chr10_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G0744 |