Basic Information
Locus ID:
Dusal.0859s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold859 | 90166 | 101092 | + | Dusal.0859s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 37,923.24 Da | 82.09 | 44.13 | -1.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 3 | 142 | 1.8E-17 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 2 | 144 | 3.92E-23 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 156 | 8.0E-26 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 145 | 20.376122 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 52 | 69 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 334 | - | - |
| Coils | Coil | Coil | 161 | 223 | - | - |
| Coils | Coil | Coil | 15 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_042927639.1 | uncharacterized protein CHLRE_02g117850v5 [Chlamydomonas reinhardtii] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7S3VKH3 | USP domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS5742 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001853 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0859s00007.v1.0 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g44540.1 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G001240, Chr28G001160 |