Basic Information
Locus ID:
Dusal.0840s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold840 | 53298 | 87158 | + | Dusal.0840s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 57,883.80 Da | 45.58 | 70.58 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 240 | 533 | 1.15321E-85 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 377 | 400 | 0.086 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 446 | 490 | 4.9E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 236 | 273 | 0.012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 495 | 532 | 2.4E-11 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 320 | 356 | 3.7E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 404 | 442 | 2.5E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 277 | 315 | 6.0E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 231 | 532 | 9.16E-84 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 450 | 536 | 6.1E-30 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 162 | 372 | 3.6E-45 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 374 | 449 | 3.2E-25 | IPR015943 |
| SMART | SM00320 | WD40_4 | 403 | 442 | 1.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 445 | 490 | 6.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 229 | 273 | 0.44 | IPR001680 |
| SMART | SM00320 | WD40_4 | 494 | 533 | 8.0E-14 | IPR001680 |
| SMART | SM00320 | WD40_4 | 361 | 400 | 2.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 357 | 1.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 315 | 1.1E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 410 | 447 | 12.973764 | - |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 107 | 126 | 9.993999 | IPR003903 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 283 | 324 | 16.122709 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 368 | 409 | 11.343905 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 283 | 318 | 12.314676 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 368 | 405 | 8.544697 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 325 | 357 | 11.243651 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 501 | 537 | 18.161219 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 501 | 537 | 16.190111 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 325 | 357 | 9.414692 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 410 | 451 | 16.924746 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 520 | 534 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 429 | 443 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 302 | 316 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 302 | 316 | 5.7E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 429 | 443 | 5.7E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 520 | 534 | 5.7E-9 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 91 | - | - |
| Coils | Coil | Coil | 178 | 215 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VMN5 | CCDC74_C domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS8459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |