Basic Information
Locus ID:
Dusal.0838s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold838 | 72132 | 85448 | + | Dusal.0838s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 30,952.71 Da | 31.57 | 77.26 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 5 | 291 | 9.77484E-77 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 86 | 123 | 6.3E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 171 | 207 | 0.027 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 47 | 81 | 1.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 128 | 162 | 6.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 3 | 38 | 3.8E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 258 | 291 | 2.1E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 3 | 290 | 3.51E-74 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 106 | 188 | 4.7E-19 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 189 | 291 | 4.0E-21 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 105 | 6.0E-30 | IPR015943 |
| SMART | SM00320 | WD40_4 | 126 | 165 | 0.0014 | IPR001680 |
| SMART | SM00320 | WD40_4 | 42 | 81 | 1.2E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 252 | 291 | 2.8E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1 | 39 | 0.22 | IPR001680 |
| SMART | SM00320 | WD40_4 | 168 | 207 | 6.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 84 | 123 | 1.6E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 210 | 249 | 5.1 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 7 | 48 | 11.611251 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 175 | 216 | 10.14085 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 133 | 163 | 9.840087 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 259 | 291 | 13.606489 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 259 | 291 | 14.886235 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 49 | 90 | 15.253835 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 91 | 124 | 10.996502 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 91 | 132 | 13.582925 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 7 | 40 | 9.361965 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 49 | 81 | 11.840134 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 110 | 124 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 194 | 208 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 110 | 124 | 1.1E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 194 | 208 | 1.1E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 68 | 82 | 1.1E-7 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042925396.1 | uncharacterized protein CHLRE_04g227900v5 [Chlamydomonas reinhardtii] | 0 |
| P93107 | Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii OX=3055 GN=PF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K3DUR3 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas reinhardtii OX=3055 GN=CHLRE_04g227900v5 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology