Basic Information
Locus ID:
Dusal.0835s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Ankyrin repeats (3 copies)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold835 | 14064 | 32347 | + | Dusal.0835s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 51,425.04 Da | 39.34 | 81.66 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16646 | mRING-HC-C2H2C4_MDM2_like | 423 | 464 | 4.39216E-12 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 420 | 467 | 8.6E-9 | - |
| Pfam | PF00023 | Ankyrin repeat | 49 | 77 | 1.3E-4 | IPR002110 |
| Pfam | PF00023 | Ankyrin repeat | 105 | 128 | 0.013 | IPR002110 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 14 | 155 | 2.49E-20 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 412 | 471 | 1.4E-11 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 5 | 160 | 5.7E-24 | IPR036770 |
| SMART | SM00248 | ANK_2a | 101 | 133 | 0.93 | IPR002110 |
| SMART | SM00248 | ANK_2a | 48 | 77 | 0.0017 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 48 | 80 | 12.66271 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 101 | 127 | 9.436445 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 101 | 133 | 10.01842 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 48 | 76 | 11.82427 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09770.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_042923388.1 | uncharacterized protein CHLRE_06g255050v5 [Chlamydomonas reinhardtii] | 0 |
| Q7XI08 | Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS34 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S3R9P5 | ANK_REP_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS21760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 21 | Dusal.0047s00017.v1.0, Dusal.0054s00006.v1.0 ... |