Basic Information
Locus ID:
Dusal.0815s00006.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Glycosyl hydrolases family 18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold815 | 65417 | 82483 | - | Dusal.0815s00006.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 46,976.76 Da | 45.68 | 81.59 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 44 | 322 | 5.6E-18 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 12 | 324 | 3.61E-27 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 259 | 296 | 3.1E-10 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 5 | 207 | 4.0E-25 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 297 | 322 | 3.1E-10 | - |
| SMART | SM00636 | 2g34 | 1 | 325 | 1.7E-4 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 344 | 20.134766 | IPR001223 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 428 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042927542.1 | uncharacterized protein CHLRE_02g112400v5 [Chlamydomonas reinhardtii] | 0 |
| Q01460 | Di-N-acetylchitobiase OS=Rattus norvegicus OX=10116 GN=Ctbs PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3VKA2 | GH18 domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS6079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology