Basic Information
Locus ID:
Dusal.0770s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold770 | 4505 | 7691 | - | Dusal.0770s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 36,430.66 Da | 49.59 | 91.99 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 140 | 210 | 1.1E-12 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 127 | 214 | 9.21E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 136 | 214 | 2.4E-17 | - |
| SMART | SM00213 | ubq_7 | 138 | 210 | 2.2E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 138 | 214 | 15.492407 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 170 | 190 | 1.0E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 191 | 212 | 1.0E-5 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53930.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_052167634.1 | ubiquitin-like [Oryza glaberrima] | 0 |
| P16709 | viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=vUbi PE=1 SV=2 | 0 | |
| TrEMBL | A2EJ38 | Ubiquitin family protein OS=Trichomonas vaginalis (strain ATCC PRA-98 / G3) OX=412133 GN=TVAG_139710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0770s00001.v1.0, Dusal.0770s00009.v1.0 |