Basic Information
Locus ID:
Dusal.0698s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Zinc finger CCCH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold698 | 18904 | 29599 | - | Dusal.0698s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.76 | 45,955.78 Da | 46.42 | 64.60 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 133 | 169 | 8.4E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 132 | 419 | 3.66E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 230 | 424 | 1.8E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 128 | 229 | 8.8E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 264 | 302 | 0.053 | IPR001680 |
| SMART | SM00320 | WD40_4 | 222 | 261 | 32.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 130 | 169 | 3.1E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 137 | 178 | 16.490309 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 137 | 174 | 12.472858 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 272 | 303 | 8.703868 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 289 | 303 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 125 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_005847367.1 | hypothetical protein CHLNCDRAFT_134174 [Chlorella variabilis] | 0 |
| TrEMBL | A0A7S3R3Y6 | WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS16716 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology