Basic Information
Locus ID:
Dusal.0690s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Short Name:
Caf1
Description:
CAF1 family ribonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold690 | 99783 | 105202 | - | Dusal.0690s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 33,890.11 Da | 24.29 | 89.44 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04857 | CAF1 family ribonuclease | 29 | 147 | 5.4E-11 | IPR006941 |
| Pfam | PF04857 | CAF1 family ribonuclease | 168 | 252 | 2.5E-6 | IPR006941 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 24 | 278 | 4.21E-91 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 16 | 282 | 4.2E-98 | IPR036397 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32070.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_002950174.1 | hypothetical protein VOLCADRAFT_80930 [Volvox carteri f. nagariensis] | 0 |
| Q9SKZ2 | Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0U4IDD5 | poly(A)-specific ribonuclease OS=Dunaliella salina OX=3046 GN=Caf1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology