Basic Information
Locus ID:
Dusal.0679s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold679 | 94376 | 105793 | + | Dusal.0679s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 81,788.70 Da | 67.30 | 56.31 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 753 | 800 | 4.6E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 753 | 799 | 1.73E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 736 | 802 | 1.6E-9 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 756 | 795 | 9.110841 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 550 | - | - |
| Coils | Coil | Coil | 209 | 248 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0679s00005.v1.0 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.879, BH03.1007, CH03.1169 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8AG0634630 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_002218 |
| Poaceae | Oryza coarctata | 2 | Oco13G005350, Oco14G006640 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G079300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703507 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr24G006820, Chr28G006320 |
| Poaceae | Zea mays | 1 | Zm00001eb094680_P002 |