Basic Information
Locus ID:
Dusal.0647s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold647 | 101048 | 105814 | + | Dusal.0647s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 24,001.35 Da | 48.31 | 68.31 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16646 | mRING-HC-C2H2C4_MDM2_like | 197 | 239 | 1.18365E-11 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 196 | 242 | 6.7E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 192 | 248 | 3.9E-15 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 131 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19080.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_042923388.1 | uncharacterized protein CHLRE_06g255050v5 [Chlamydomonas reinhardtii] | 0 |
| Q84ME1 | Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana OX=3702 GN=LUL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3QSU7 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS7207 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 21 | Dusal.0047s00017.v1.0, Dusal.0054s00006.v1.0 ... |