Basic Information
Locus ID:
Dusal.0646s00008.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold646 | 114249 | 143630 | + | Dusal.0646s00008.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 227,948.95 Da | 67.76 | 63.86 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1283 | 1412 | 6.1E-6 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1241 | 1413 | 3.5E-6 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1102 | 1123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1438 | 1456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 822 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1438 | 1460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 993 | 1017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1483 | 1511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1483 | 1532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1003 | 1017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1914 | 1963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1072 | 1134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1073 | 1094 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1625 | 1649 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 885 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2076 | 2137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1913 | 1965 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 967 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 809 | - | - |
| Coils | Coil | Coil | 1922 | 1942 | - | - |
| Coils | Coil | Coil | 893 | 939 | - | - |
| Coils | Coil | Coil | 1484 | 1518 | - | - |
| Coils | Coil | Coil | 775 | 795 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VQ58 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS14634 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg9246 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3879 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah026371 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g136210 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14023, Sbi_jg51934 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg9936 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00023562, GOSA_00023563 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl34851, Sgl40238 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000026349 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0016880, CQ.Regalona.r1.6BG0017990 |
| Apiaceae | Apium graveolens | 1 | Ag5G02080 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103722881 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2758.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G33661 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G26330.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10006590m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g22360.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB04g040470.2N, BniB04g045200.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0440 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0457 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g03020 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0646s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g29850 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.377 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00027304 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G32599 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.1182, AH03.1183, BH03.1346 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0328520, gene-QOZ80_4BG0360570 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0467390.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_003840 |
| Poaceae | Oryza coarctata | 1 | Oco17G000080 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g01360.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G098200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0705155 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr0G006340, Chr0G006350, Chr23G019290, Chr26G000610 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G272500 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC5AG026270, gene_TRIDC5BG027210 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G158800.1, TraesCS5B02G155300.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb095700_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-46891 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19193 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.514, evm.TU.LG21.211 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g06220 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.458 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-22834, nbisL1-mrna-22880 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1663 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14969 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000013l.314, evm.TU.utg000013l.315 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00006702 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-7222, nbisL1-mrna-7223 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14910 |
| Salicaceae | Populus euphratica | 2 | populus_peu06822, populus_peu06823 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641940 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018710 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.24214_chr10_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G0477 |
| Zosteraceae | Zostera marina | 1 | Zosma03g20870.v3.1 |