Basic Information
Locus ID:
Dusal.0645s00008.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Zinc-binding domain, present in Dystrophin, CREB-binding protein.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold645 | 124550 | 133096 | - | Dusal.0645s00008.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 12,771.78 Da | 49.81 | 77.59 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 59 | 100 | 6.6E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 43 | 102 | 4.42E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 44 | 108 | 4.2E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 63 | 96 | 10.792683 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_018827722.1 | E3 ubiquitin-protein ligase RGLG3-like [Juglans regia] | 0 |
| TrEMBL | A0A2P2KRK0 | E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 3 | Ag2G02016, Ag4G00745, Ag6G00049 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0645s00008.v1.0 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-7304 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-10789 |