Basic Information
Locus ID:
Dusal.0607s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold607 | 27434 | 33431 | + | Dusal.0607s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.98 | 64,413.05 Da | 87.74 | 54.30 | -1.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16646 | mRING-HC-C2H2C4_MDM2_like | 529 | 571 | 3.84689E-12 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 526 | 575 | 7.1E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 525 | 578 | 2.79E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 520 | 581 | 1.3E-13 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 283 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VSC9 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS16437 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 21 | Dusal.0047s00017.v1.0, Dusal.0054s00006.v1.0 ... |