Basic Information
Locus ID:
Dusal.0602s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
In Between Ring fingers
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold602 | 140350 | 144804 | - | Dusal.0602s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 19,332.03 Da | 38.24 | 73.69 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 115 | 172 | 1.25E-10 | - |
| Gene3D | G3DSA:1.20.120.1750 | - | 87 | 176 | 1.3E-14 | - |
| ProSiteProfiles | PS50157 | Zinc finger C2H2 type domain profile. | 151 | 179 | 9.556385 | IPR013087 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 6.0 | - |
| ProSitePatterns | PS00028 | Zinc finger C2H2 type domain signature. | 153 | 174 | - | IPR013087 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A5C3PLV7 | RING-type E3 ubiquitin transferase OS=Polyporus arcularius HHB13444 OX=1314778 GN=K466DRAFT_415089 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0602s00007.v1.0 |
| Poaceae | Echinochloa crus-galli | 4 | BH08.2499, BH09.577, CH08.2686, CH08.2687 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8BG0668950 |