Basic Information
Locus ID:
Dusal.0593s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Short Name:
IFT172
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold593 | 47329 | 103325 | - | Dusal.0593s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 186,897.66 Da | 39.70 | 82.22 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 17 | 319 | 1.77E-35 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 249 | 577 | 2.93E-14 | IPR036322 |
| Gene3D | G3DSA:1.25.40.470 | - | 609 | 784 | 1.5E-15 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 322 | 570 | 2.7E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 197 | 320 | 9.6E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 12 | 196 | 2.8E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 2 | 44 | 6.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 49 | 93 | 2.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 230 | 274 | 320.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 193 | 228 | 250.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 143 | 184 | 20.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 284 | 319 | 2.1 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_001691740.1 | uncharacterized protein CHLRE_17g703900v5 [Chlamydomonas reinhardtii] | 0 |
| Q5DM57 | Intraflagellar transport protein 172 OS=Chlamydomonas reinhardtii OX=3055 GN=IFT172 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3QUF8 | WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS8377 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Dusal.0593s00003.v1.0.