Basic Information
Locus ID:
Dusal.0568s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
NACHT domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold568 | 26017 | 56890 | + | Dusal.0568s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 119,249.67 Da | 41.24 | 86.50 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 552 | 858 | 4.05377E-88 | - |
| CDD | cd00200 | WD40 | 786 | 1020 | 1.69739E-54 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 785 | 816 | 0.0015 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 592 | 630 | 1.0E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 737 | 773 | 2.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 552 | 588 | 7.6E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 471 | 505 | 6.0E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 641 | 677 | 4.1E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 904 | 941 | 1.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 862 | 900 | 8.2E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 820 | 858 | 5.6E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 694 | 723 | 0.0066 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 643 | 976 | 3.92E-71 | IPR011047 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 472 | 724 | 1.8E-65 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 784 | 867 | 2.2E-28 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 691 | 783 | 8.4E-20 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 868 | 1051 | 1.3E-34 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 459 | 597 | 1.4E-36 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 598 | 690 | 1.9E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 508 | 546 | 0.0016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 469 | 505 | 0.028 | IPR001680 |
| SMART | SM00320 | WD40_4 | 734 | 773 | 3.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 777 | 816 | 6.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 903 | 942 | 1.8E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 684 | 723 | 3.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 819 | 858 | 2.5E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 861 | 900 | 1.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 591 | 630 | 8.0E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 549 | 588 | 6.8E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 638 | 677 | 3.0E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 945 | 984 | 23.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 476 | 514 | 11.878597 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 784 | 820 | 10.126507 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 598 | 631 | 12.182859 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 645 | 681 | 12.683765 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 476 | 508 | 9.836508 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 910 | 946 | 11.65559 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 784 | 825 | 13.014815 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 556 | 597 | 17.994127 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 741 | 775 | 11.049229 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 826 | 859 | 10.996502 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 910 | 951 | 14.953072 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 868 | 909 | 14.886235 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 741 | 775 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 556 | 593 | 13.922852 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 826 | 867 | 14.151034 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 868 | 904 | 11.471045 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 598 | 631 | 14.752563 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 645 | 686 | 15.688272 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 691 | 732 | 9.840087 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 929 | 943 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 887 | 901 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 617 | 631 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 575 | 589 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 664 | 678 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 803 | 817 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 845 | 859 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 710 | 724 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 575 | 589 | 7.3E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 664 | 678 | 7.3E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 617 | 631 | 7.3E-8 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A699YZT4 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Haematococcus lacustris OX=44745 GN=HaLaN_08210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |