Basic Information
Locus ID:
Dusal.0542s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold542 | 162494 | 208141 | - | Dusal.0542s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 99,518.24 Da | 36.65 | 81.38 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 690 | 726 | 8.1E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 444 | 475 | 0.033 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 615 | 644 | 1.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 121 | 154 | 6.8E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 64 | 108 | 0.078 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 262 | 727 | 2.29E-45 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 28 | 398 | 1.25E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 251 | 536 | 7.8E-30 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 13 | 200 | 7.2E-22 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 601 | 847 | 4.8E-26 | IPR015943 |
| SMART | SM00320 | WD40_4 | 60 | 108 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 436 | 475 | 0.04 | IPR001680 |
| SMART | SM00320 | WD40_4 | 378 | 433 | 0.02 | IPR001680 |
| SMART | SM00320 | WD40_4 | 687 | 726 | 6.5E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 13 | 54 | 31.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 477 | 519 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 607 | 644 | 1.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 251 | 291 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 117 | 154 | 1.3E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 443 | 484 | 10.642123 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 694 | 735 | 13.014815 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 124 | 154 | 9.889235 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 614 | 644 | 11.945434 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 614 | 644 | 9.968326 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 420 | 433 | 8.804123 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 443 | 480 | 8.676514 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 694 | 726 | 10.311051 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 124 | 154 | 11.845179 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 506 | 520 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 462 | 476 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 420 | 434 | 2.7E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 141 | 155 | 2.7E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 631 | 645 | 2.7E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 923 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 543 | 568 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 831 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042923953.1 | uncharacterized protein CHLRE_06g280350v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3VLZ4 | Guanine nucleotide-binding protein subunit beta-like protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS9790 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 25 | Dusal.0002s00013.v1.0, Dusal.0075s00019.v1.0 ... |