Basic Information
Locus ID:
Dusal.0526s00009.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold526 | 174041 | 197273 | + | Dusal.0526s00009.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 70,578.20 Da | 38.78 | 78.77 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 416 | 616 | 3.6449E-76 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 455 | 493 | 2.6E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 416 | 451 | 9.3E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 544 | 576 | 0.041 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 14 | 293 | 6.4E-34 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 581 | 616 | 5.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 498 | 535 | 3.4E-11 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 310 | 1.64E-47 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 412 | 617 | 4.03E-67 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 313 | 544 | 3.6E-56 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 545 | 638 | 5.2E-23 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 120 | 312 | 9.2E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 83 | 2.5E-7 | - |
| SMART | SM00320 | WD40_4 | 538 | 576 | 5.5E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 454 | 493 | 9.5E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 412 | 451 | 3.6E-10 | IPR001680 |
| SMART | SM00220 | serkin_6 | 12 | 303 | 5.3E-22 | IPR000719 |
| SMART | SM00320 | WD40_4 | 496 | 535 | 1.3E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 579 | 618 | 7.5E-6 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 461 | 494 | 11.629227 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 503 | 540 | 13.975578 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 419 | 456 | 13.105581 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 12 | 303 | 30.81708 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 586 | 616 | 10.601049 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 551 | 585 | 9.606159 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 586 | 616 | 12.74747 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 419 | 460 | 17.158672 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 461 | 502 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 503 | 544 | 17.927292 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 522 | 536 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 480 | 494 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 438 | 452 | - | IPR019775 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 18 | 43 | - | IPR017441 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 522 | 536 | 1.8E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 438 | 452 | 1.8E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 480 | 494 | 1.8E-8 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 643 | - | - |
| Coils | Coil | Coil | 314 | 393 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65240.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021899949.1 | E3 ubiquitin-protein ligase KEG-like isoform X2 [Carica papaya] | 0 |
| C0LGX1 | Probable LRR receptor-like serine/threonine-protein kinase At5g65240 OS=Arabidopsis thaliana OX=3702 GN=At5g65240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S0WLZ4 | Protein kinase domain-containing protein OS=Chlamydomonas leiostraca OX=1034604 GN=CLEI1391_LOCUS5420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 22 | Dusal.0024s00037.v1.0, Dusal.0024s00038.v1.0 ... |