Basic Information
Locus ID:
Dusal.0526s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Domain of unknown function (DUF3337)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold526 | 130238 | 138403 | + | Dusal.0526s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 11,626.04 Da | 19.84 | 80.00 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 66 | 102 | 7.5E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 24 | 61 | 2.4E-9 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 16 | 104 | 1.28E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 14 | 106 | 1.1E-36 | IPR015943 |
| SMART | SM00320 | WD40_4 | 64 | 103 | 6.6E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 22 | 61 | 1.3E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 29 | 70 | 18.361729 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 71 | 106 | 14.555574 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 29 | 64 | 14.397394 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 71 | 106 | 16.089291 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 48 | 62 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A354P8K7 | ANAPC4_WD40 domain-containing protein OS=Planctomycetaceae bacterium OX=2026779 GN=DDZ51_09895 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g128360 |
| Amaranthaceae | Suaeda glauca | 7 | Sgl04549, Sgl09595, Sgl15470, Sgl22341, Sgl27592, Sgl44438 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000012172 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10023689m.g.v1.0, Thhalv10024116m.g.v1.0 |
| Brassicaceae | Brassica nigra | 1 | BniB05g063820.2N |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0526s00007.v1.0, Dusal.0840s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g03560 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr0G013900 |
| Poaceae | Zea mays | 4 | Zm00001eb054750_P001, Zm00001eb356040_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-31254, nbis-gene-45313 |