Basic Information
Locus ID:
Dusal.0506s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold506 | 27802 | 84451 | - | Dusal.0506s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 181,104.94 Da | 48.94 | 82.79 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 314 | 344 | 0.083 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 399 | 424 | 0.11 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 16 | 677 | 3.2E-25 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 9 | 143 | 2.8E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 239 | 696 | 9.1E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 305 | 345 | 3.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 637 | 676 | 5.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 386 | 428 | 0.059 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 313 | 347 | 9.361965 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 313 | 347 | 11.176815 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 396 | 424 | 8.570195 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1312 | 1332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 737 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 943 | 959 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1339 | 1380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1306 | 1380 | - | - |
| Coils | Coil | Coil | 1520 | 1540 | - | - |
| Coils | Coil | Coil | 1140 | 1160 | - | - |
| Coils | Coil | Coil | 1020 | 1040 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002952887.1 | flagellar associated protein, partial [Volvox carteri f. nagariensis] | 0 |
| A8JAF2 | Cilia- and flagella-associated protein 43 OS=Chlamydomonas reinhardtii OX=3055 GN=CFAP43 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3QXY1 | Cilia- and flagella-associated protein 43 OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS10794 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0235s00006.v1.0, Dusal.0235s00007.v1.0 ... |