Basic Information
Locus ID:
Dusal.0501s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold501 | 79490 | 100680 | - | Dusal.0501s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.75 | 55,536.80 Da | 51.14 | 66.43 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16646 | mRING-HC-C2H2C4_MDM2_like | 518 | 558 | 2.17597E-12 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 515 | 563 | 2.6E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 508 | 568 | 8.3E-15 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 165 | - | - |
| Coils | Coil | Coil | 28 | 48 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042916247.1 | uncharacterized protein CHLRE_16g681354v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3QSU7 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS7207 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 21 | Dusal.0047s00017.v1.0, Dusal.0054s00006.v1.0 ... |