Basic Information
Locus ID:
Dusal.0491s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
HELP motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold491 | 93809 | 112182 | + | Dusal.0491s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.15 | 60,675.65 Da | 42.76 | 70.05 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03451 | HELP motif | 184 | 253 | 2.2E-17 | IPR005108 |
| Pfam | PF00400 | WD domain, G-beta repeat | 496 | 523 | 0.018 | IPR001680 |
| SUPERFAMILY | SSF47473 | EF-hand | 86 | 141 | 8.92E-7 | IPR011992 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 227 | 529 | 8.06E-23 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 223 | 550 | 4.2E-56 | IPR015943 |
| Gene3D | G3DSA:1.10.238.10 | - | 36 | 193 | 7.9E-7 | - |
| SMART | SM00320 | WD40_4 | 370 | 417 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 256 | 311 | 64.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 326 | 367 | 10.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 485 | 523 | 0.4 | IPR001680 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 91 | 125 | 9.520128 | IPR002048 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 498 | 532 | 8.703868 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 54 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042918795.1 | uncharacterized protein CHLRE_12g538850v5 [Chlamydomonas reinhardtii] | 0 |
| Q5SQM0 | Echinoderm microtubule-associated protein-like 6 OS=Mus musculus OX=10090 GN=Eml6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S3QZ06 | EF-hand domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS12453 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ... |