Basic Information
Locus ID:
Dusal.0471s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold471 | 95799 | 140114 | + | Dusal.0471s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 87,246.85 Da | 49.77 | 76.35 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 78 | 409 | 8.15242E-46 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 154 | 191 | 0.012 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 288 | 319 | 0.037 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 113 | 149 | 5.7E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 372 | 409 | 0.069 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 349 | 532 | 2.56E-15 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 33 | 420 | 1.23E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 26 | 246 | 5.7E-39 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 250 | 562 | 3.4E-39 | IPR015943 |
| SMART | SM00320 | WD40_4 | 236 | 275 | 71.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 322 | 364 | 37.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 319 | 0.0064 | IPR001680 |
| SMART | SM00320 | WD40_4 | 110 | 149 | 2.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 463 | 515 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 68 | 107 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 420 | 461 | 2.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 370 | 409 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 152 | 191 | 3.3E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 159 | 200 | 14.585471 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 117 | 158 | 13.85027 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 377 | 413 | 8.887423 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 159 | 194 | 11.022865 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 294 | 328 | 10.842632 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 117 | 149 | 11.181047 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 377 | 418 | 11.243651 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 306 | 320 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 396 | 410 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 178 | 192 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 306 | 320 | 8.0E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 178 | 192 | 8.0E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 136 | 150 | 8.0E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 654 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042922415.1 | uncharacterized protein CHLRE_07g313850v5 [Chlamydomonas reinhardtii] | 0 |
| Q17I16 | WD repeat-containing protein on Y chromosome OS=Aedes aegypti OX=7159 GN=WDY PE=4 SV=1 | 0 | |
| TrEMBL | A0A250X3I4 | Calmodulin OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g4933.t1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0255s00013.v1.0, Dusal.0471s00005.v1.0 |