Basic Information
Locus ID:
Dusal.0466s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold466 | 92589 | 122264 | + | Dusal.0466s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.87 | 42,704.31 Da | 33.99 | 86.19 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00268 | DEADc | 19 | 182 | 6.14197E-80 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 89 | 177 | 2.0E-22 | IPR011545 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 28 | 88 | 1.3E-11 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 128 | 331 | 4.37E-28 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 20 | 186 | 5.18E-50 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 265 | 329 | 5.8E-15 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 201 | 264 | 1.3E-7 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 90 | 195 | 1.6E-34 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 15 | 89 | 7.0E-22 | IPR027417 |
| SMART | SM00487 | ultradead3 | 23 | 211 | 1.3E-38 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 150 | 325 | 8.771118 | IPR001650 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 35 | 189 | 21.10964 | IPR014001 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 135 | 143 | - | IPR000629 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_042928396.1 | uncharacterized protein CHLRE_01g021600v5 [Chlamydomonas reinhardtii] | 0 |
| Q8H136 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7S3QW36 | ATP-dependent RNA helicase DBP3 OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS10100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology