Basic Information
Locus ID:
Dusal.0450s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold450 | 40738 | 50864 | + | Dusal.0450s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 42,917.57 Da | 41.69 | 72.85 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 88 | 376 | 6.83187E-105 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 128 | 166 | 9.2E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 341 | 376 | 1.6E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 214 | 252 | 1.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 257 | 294 | 2.9E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 303 | 336 | 3.3E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 171 | 208 | 6.5E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 88 | 124 | 3.4E-10 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 85 | 376 | 3.72E-93 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 174 | 300 | 4.2E-49 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 87 | 173 | 4.9E-35 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 301 | 384 | 1.9E-31 | IPR015943 |
| SMART | SM00320 | WD40_4 | 85 | 124 | 1.1E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 340 | 379 | 3.1E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 211 | 252 | 1.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 255 | 294 | 8.7E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 127 | 166 | 5.7E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 297 | 336 | 5.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 169 | 208 | 3.0E-11 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 134 | 169 | 12.499222 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 218 | 261 | 10.441614 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 92 | 129 | 14.792847 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 176 | 213 | 12.499222 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 134 | 175 | 16.256382 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 304 | 336 | 14.552052 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 262 | 298 | 13.791033 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 176 | 217 | 16.055872 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 92 | 133 | 19.030092 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 347 | 376 | 10.785595 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 304 | 336 | 12.024679 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 347 | 376 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 262 | 303 | 17.359182 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 153 | 167 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 239 | 253 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 111 | 125 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 281 | 295 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 195 | 209 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 153 | 167 | 2.6E-10 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 281 | 295 | 2.6E-10 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 111 | 125 | 2.6E-10 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |