Basic Information
Locus ID:
Dusal.0424s00009.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
microtubule binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold424 | 144639 | 176662 | - | Dusal.0424s00009.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 107,271.52 Da | 39.80 | 76.76 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 368 | 405 | 2.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 910 | 942 | 0.0073 | IPR001680 |
| Pfam | PF03451 | HELP motif | 302 | 362 | 8.5E-16 | IPR005108 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 802 | 944 | 4.76E-13 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 365 | 837 | 3.84E-39 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 320 | 943 | 9.1E-180 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 332 | 674 | 9.1E-180 | IPR015943 |
| SMART | SM00320 | WD40_4 | 514 | 551 | 3.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 411 | 451 | 0.23 | IPR001680 |
| SMART | SM00320 | WD40_4 | 705 | 746 | 7.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 566 | 605 | 2.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 793 | 832 | 4.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 364 | 405 | 0.43 | IPR001680 |
| SMART | SM00320 | WD40_4 | 856 | 897 | 37.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 750 | 789 | 0.032 | IPR001680 |
| SMART | SM00320 | WD40_4 | 662 | 702 | 2.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 903 | 943 | 0.13 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 159 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002955295.1 | hypothetical protein VOLCADRAFT_96225 [Volvox carteri f. nagariensis] | 0 |
| Q7TNG5 | Echinoderm microtubule-associated protein-like 2 OS=Mus musculus OX=10090 GN=Eml2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3VPE2 | HELP domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS11600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ... |