Basic Information
Locus ID:
Dusal.0422s00003.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold422 | 33735 | 48614 | - | Dusal.0422s00003.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 56,604.89 Da | 38.67 | 78.05 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 248 | 526 | 7.28194E-96 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 322 | 357 | 3.8E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 405 | 441 | 3.1E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 279 | 316 | 2.2E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 363 | 400 | 1.3E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 448 | 483 | 3.2E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 489 | 525 | 2.2E-10 | IPR001680 |
| Pfam | PF13676 | TIR domain | 49 | 125 | 1.8E-6 | IPR000157 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 246 | 525 | 2.93E-90 | IPR036322 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 48 | 100 | 1.29E-6 | IPR035897 |
| Gene3D | G3DSA:3.40.50.10140 | - | 43 | 146 | 7.6E-8 | IPR035897 |
| Gene3D | G3DSA:2.130.10.10 | - | 173 | 362 | 6.8E-44 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 363 | 529 | 4.3E-63 | IPR015943 |
| SMART | SM00320 | WD40_4 | 245 | 275 | 0.49 | IPR001680 |
| SMART | SM00320 | WD40_4 | 403 | 441 | 1.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 444 | 483 | 1.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 316 | 7.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 361 | 400 | 2.7E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 487 | 526 | 1.9E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 358 | 4.1E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 326 | 367 | 15.220417 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 410 | 446 | 11.365591 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 285 | 319 | 10.390142 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 368 | 409 | 17.893873 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 494 | 529 | 17.359182 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 368 | 403 | 13.632853 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 494 | 529 | 15.557388 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 410 | 450 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 326 | 358 | 12.288313 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 285 | 325 | 13.382416 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 451 | 483 | 12.288313 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 451 | 483 | 14.886235 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 428 | 442 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 387 | 401 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 303 | 317 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 387 | 401 | 1.3E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 428 | 442 | 1.3E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 303 | 317 | 1.3E-9 | IPR020472 |
| Coils | Coil | Coil | 217 | 237 | - | - |
| Coils | Coil | Coil | 179 | 202 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7R9VEH2 | TIR domain-containing protein OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS11023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |