Basic Information
Locus ID:
Dusal.0401s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold401 | 30896 | 43548 | + | Dusal.0401s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 54,592.15 Da | 52.85 | 68.23 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 468 | 525 | 2.0E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 461 | 527 | 2.28E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 458 | 531 | 2.3E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 470 | 520 | 0.0028 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 470 | 521 | 10.438611 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 402 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 332 | - | - |
| Coils | Coil | Coil | 39 | 62 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_001694820.2 | uncharacterized protein CHLRE_09g399439v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A6A0AF45 | RING-type domain-containing protein (Fragment) OS=Haematococcus lacustris OX=44745 GN=HaLaN_29835 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0057s00007.v1.0, Dusal.0401s00002.v1.0 |