Basic Information
Locus ID:
Dusal.0385s00009.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
endoplasmic reticulum unfolded protein response
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold385 | 226068 | 243132 | + | Dusal.0385s00009.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 30,676.65 Da | 21.08 | 97.44 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16475 | RING-H2_RNF121_like | 222 | 277 | 3.0769E-21 | - |
| Pfam | PF13639 | Ring finger domain | 223 | 277 | 2.3E-6 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 217 | 277 | 3.93E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 202 | 277 | 1.8E-10 | IPR013083 |
| SMART | SM00184 | ring_2 | 224 | 276 | 0.0015 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 224 | 277 | 11.36805 | IPR001841 |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042926225.1 | uncharacterized protein CHLRE_03g185100v5 [Chlamydomonas reinhardtii] | 0 |
| Q6DD32 | E3 ubiquitin ligase Rnf121 OS=Xenopus laevis OX=8355 GN=rnf121 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S3QMI0 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS2113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg37761 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0385s00009.v1.0 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015083 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132620328 |
| Solanaceae | Solanum chilense | 2 | SOLCI001107600, SOLCI003716500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014240 |