Basic Information
Locus ID:
Dusal.0372s00004.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold372 | 73305 | 86868 | + | Dusal.0372s00004.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 36,552.25 Da | 38.86 | 78.09 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 49 | 338 | 2.95831E-103 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 257 | 295 | 3.5E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 218 | 253 | 2.2E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 300 | 337 | 1.5E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 132 | 169 | 1.7E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 89 | 127 | 1.1E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 48 | 85 | 2.7E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 173 | 211 | 1.9E-9 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 46 | 339 | 2.38E-98 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 177 | 5.7E-56 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 178 | 260 | 2.5E-31 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 261 | 341 | 2.0E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 214 | 253 | 5.6E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 299 | 338 | 5.9E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 130 | 169 | 3.4E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 88 | 127 | 2.5E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 256 | 295 | 1.6E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 172 | 211 | 1.2E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 46 | 85 | 6.5E-11 | IPR001680 |
| PIRSF | PIRSF002394 | GNBP_B | 2 | 340 | 7.2E-75 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 221 | 262 | 17.058418 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 179 | 220 | 17.325764 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 137 | 178 | 16.85791 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 137 | 173 | 13.105581 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 53 | 94 | 16.991583 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 179 | 214 | 13.47467 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 306 | 341 | 14.97739 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 95 | 130 | 12.815584 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 221 | 256 | 13.606489 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 263 | 295 | 15.019908 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 306 | 341 | 16.623981 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 263 | 295 | 12.393768 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 95 | 136 | 16.757654 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 53 | 90 | 13.079218 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 114 | 128 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 240 | 254 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 156 | 170 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 198 | 212 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 198 | 212 | 7.6E-10 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 240 | 254 | 7.6E-10 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 325 | 339 | 7.6E-10 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| Coils | Coil | Coil | 5 | 36 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |