halophFGD

Basic Information

Locus ID: Dusal.0371s00014.v1.0

Species & Taxonomic ID: Dunaliella salina & 3046

Genome Assembly: v1.0

Description: Belongs to the WD repeat SEC13 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold371	227102	242713	-	Dusal.0371s00014.v1.0

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.08	35,120.40 Da	29.03	78.88	0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	20	216	1.65E-15	IPR036322
Gene3D	G3DSA:2.130.10.10	-	14	256	1.2E-23	IPR015943
SMART	SM00320	WD40_4	53	93	7.2	IPR001680
SMART	SM00320	WD40_4	123	164	0.0051	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K14299 (nucleoporin SEH1)

Pathway:

ko03013 (Nucleocytoplasmic transport) map03013 (Nucleocytoplasmic transport) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway)

Best hit

Source	Best Hit ID	Description
RefSeq	XP_001693095.1	uncharacterized protein CHLRE_03g192000v5 [Chlamydomonas reinhardtii]
Swiss-Prot	P53011	Nucleoporin SEH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEH1 PE=1 SV=1
TrEMBL	A0A7S3RAJ7	WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS22163 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for Dusal.0371s00014.v1.0.