Basic Information
Locus ID:
Dusal.0364s00012.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
spectrin binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold364 | 245213 | 278085 | + | Dusal.0364s00012.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 73,442.67 Da | 61.59 | 73.28 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 46 | 113 | 3.4E-8 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 48 | 229 | 1.03E-24 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 541 | 589 | 4.62E-7 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 3 | 240 | 1.1E-29 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 524 | 597 | 1.0E-6 | IPR013083 |
| SMART | SM00248 | ANK_2a | 56 | 87 | 0.058 | IPR002110 |
| SMART | SM00248 | ANK_2a | 136 | 165 | 1.0 | IPR002110 |
| SMART | SM00184 | ring_2 | 546 | 587 | 0.0076 | IPR001841 |
| SMART | SM00248 | ANK_2a | 180 | 210 | 1.1 | IPR002110 |
| SMART | SM00248 | ANK_2a | 90 | 119 | 2.2 | IPR002110 |
| SMART | SM00248 | ANK_2a | 5 | 34 | 3300.0 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 546 | 588 | 10.246822 | IPR001841 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 180 | 206 | 9.675228 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 180 | 206 | 9.6979 | IPR002110 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 561 | 570 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 423 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VHU7 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS1622 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 9 | Dusal.0012s00028.v1.0, Dusal.0195s00013.v1.0 ... |