Basic Information
Locus ID:
Dusal.0364s00010.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
protein ubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold364 | 199182 | 227346 | - | Dusal.0364s00010.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 77,903.07 Da | 63.13 | 72.32 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 89 | 156 | 3.5E-8 | IPR020683 |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 672 | 721 | 4.1E-7 | - |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 96 | 273 | 1.66E-24 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 670 | 721 | 1.22E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 666 | 724 | 1.1E-7 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 44 | 285 | 8.9E-30 | IPR036770 |
| SMART | SM00184 | ring_2 | 675 | 716 | 0.0042 | IPR001841 |
| SMART | SM00248 | ANK_2a | 133 | 162 | 2.2 | IPR002110 |
| SMART | SM00248 | ANK_2a | 99 | 130 | 0.26 | IPR002110 |
| SMART | SM00248 | ANK_2a | 223 | 252 | 0.87 | IPR002110 |
| SMART | SM00248 | ANK_2a | 179 | 208 | 0.84 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 675 | 717 | 10.33534 | IPR001841 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 223 | 249 | 9.675228 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 223 | 255 | 9.72461 | IPR002110 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 690 | 699 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 666 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 571 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 395 | - | - |
| Coils | Coil | Coil | 373 | 396 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VHU7 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS1622 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 9 | Dusal.0012s00028.v1.0, Dusal.0195s00013.v1.0 ... |