Basic Information
Locus ID:
Dusal.0364s00002.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold364 | 16126 | 34893 | - | Dusal.0364s00002.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 47,863.76 Da | 77.85 | 67.64 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 401 | 454 | 5.01E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 382 | 459 | 2.2E-5 | IPR013083 |
| SMART | SM00184 | ring_2 | 407 | 448 | 0.0098 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 407 | 449 | 10.246822 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 422 | 431 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 192 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3VHU7 | RING-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS1622 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 9 | Dusal.0012s00028.v1.0, Dusal.0195s00013.v1.0 ... |