Basic Information
Locus ID:
Dusal.0343s00019.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
UTP15 C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold343 | 272346 | 279245 | - | Dusal.0343s00019.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.33 | 26,455.46 Da | 46.13 | 65.43 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 117 | 153 | 0.0019 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 67 | 111 | 0.12 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 159 | 196 | 0.023 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 40 | 222 | 1.36E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 39 | 228 | 2.9E-37 | IPR015943 |
| SMART | SM00320 | WD40_4 | 114 | 153 | 0.0017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 72 | 111 | 0.0017 | IPR001680 |
| SMART | SM00320 | WD40_4 | 156 | 196 | 8.9E-5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 163 | 198 | 9.205141 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 121 | 162 | 13.415834 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 121 | 157 | 10.337415 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 140 | 154 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 98 | 112 | 1.3E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 140 | 154 | 1.3E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 183 | 197 | 1.3E-5 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002956074.1 | hypothetical protein VOLCADRAFT_66565 [Volvox carteri f. nagariensis] | 0 |
| Q7ZXZ2 | U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis OX=8355 GN=utp15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7S3QSX2 | UTP15_C domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS7267 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg37905, jg37908 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_11643 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022014 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg1521, Sbi_jg35029 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg3224 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011943 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73790, Sgl77295 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014984, gene:ENSEOMG00000018428 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0008420, CQ.Regalona.r1.2BG0009330 |
| Apiaceae | Apium graveolens | 1 | Ag11G04616 |
| Arecaceae | Cocos nucifera | 1 | COCNU_04G005230 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709103 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_10.686.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri11G26437, Ftri12G11476 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G47990.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10001392m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g29910.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g000180.2N, BniS05187g230.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g14080 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0343s00018.v1.0, Dusal.0343s00019.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate04g27080, gene.Thate06g05810 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2599 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.251 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00008191 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.624, BH03.754, CH03.847 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0249400, gene-QOZ80_3BG0278810 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0747280.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_000111, gene-QYE76_042092, gene-QYE76_042973 |
| Poaceae | Oryza coarctata | 2 | Oco13G004000, Oco14G004460 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g12320.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G219000 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G035260, Chr04G011990, Chr12G004340, Chr13G012160 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G698200, Tel7E01G931100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG074480, gene_TRIDC7BG070780 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G534500.1.cds1, TraesCS7B02G451600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb303580_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-49982 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3585 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1518, evm.TU.LG22.1193 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g29740, gene.Posoc04g16550 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.921 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11422 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7727 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11541 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000006l.97 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013836 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20729 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7537 |
| Salicaceae | Populus euphratica | 3 | populus_peu01093, populus_peu27190, populus_peu37847 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132609293 |
| Solanaceae | Solanum chilense | 1 | SOLCI004455100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107019796 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_11921 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G2052 |
| Zosteraceae | Zostera marina | 1 | Zosma03g30380.v3.1 |