Basic Information
Locus ID:
Dusal.0335s00019.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold335 | 287539 | 298499 | + | Dusal.0335s00019.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 54,833.36 Da | 26.09 | 71.44 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 111 | 399 | 7.10056E-94 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 197 | 231 | 1.3E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 368 | 399 | 0.042 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 151 | 189 | 5.8E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 322 | 356 | 3.1E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 278 | 315 | 2.0E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 436 | 470 | 1.6E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 478 | 509 | 1.4E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 114 | 147 | 2.1E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 70 | 105 | 3.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 236 | 272 | 3.7E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 154 | 429 | 1.71E-85 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 431 | 509 | 6.77E-23 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 69 | 190 | 1.16E-37 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 364 | 429 | 3.2E-18 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 57 | 154 | 4.4E-28 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 237 | 363 | 3.6E-45 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 155 | 236 | 2.7E-35 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 430 | 510 | 1.6E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 108 | 147 | 2.8E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 360 | 399 | 1.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 431 | 470 | 9.8E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 402 | 429 | 92.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 192 | 231 | 3.4E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 67 | 105 | 0.0011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 234 | 273 | 4.7E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 473 | 512 | 3.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 315 | 1.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 150 | 189 | 1.4E-12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 357 | 2.9E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 199 | 240 | 15.989036 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 438 | 471 | 13.369217 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 367 | 408 | 12.947979 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 199 | 236 | 12.472858 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 73 | 110 | 8.834696 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 241 | 282 | 16.423473 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 283 | 324 | 14.652308 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 73 | 114 | 11.009724 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 157 | 198 | 16.690819 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 367 | 404 | 10.15287 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 283 | 315 | 11.602863 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 325 | 358 | 10.363778 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 325 | 366 | 12.814306 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 157 | 190 | 13.369217 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 115 | 156 | 17.426018 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 480 | 509 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 241 | 278 | 12.472858 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 438 | 479 | 16.690819 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 115 | 152 | 13.527399 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 344 | 358 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 134 | 148 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 92 | 106 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 218 | 232 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 386 | 400 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 457 | 471 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 176 | 190 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 134 | 148 | 6.4E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 302 | 316 | 6.4E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 218 | 232 | 6.4E-9 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A699YZT4 | WD_REPEATS_REGION domain-containing protein (Fragment) OS=Haematococcus lacustris OX=44745 GN=HaLaN_08210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |