Basic Information
Locus ID:
Dusal.0327s00013.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
BEST Arabidopsis thaliana protein match is Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold327 | 229778 | 283376 | + | Dusal.0327s00013.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.07 | 251,699.13 Da | 74.12 | 64.76 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 1775 | 1962 | 7.4E-8 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 1765 | 1961 | 2.16E-9 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1752 | 2013 | 1.5E-12 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1766 | 2330 | 10.748588 | IPR028889 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 745 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1144 | 1158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 848 | 864 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1441 | 1537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1055 | 1087 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1159 | 1200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2046 | 2098 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1619 | 1645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1323 | 1377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1673 | 1712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2075 | 2098 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2336 | 2362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1126 | 1277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1810 | 1853 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1553 | 1585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 912 | 1087 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1439 | 1720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1538 | 1552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 958 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 833 | 847 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1031 | 1045 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1236 | 1251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2051 | 2066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1318 | 1379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1810 | 1847 | - | - |
| Coils | Coil | Coil | 437 | 474 | - | - |
| Coils | Coil | Coil | 1341 | 1370 | - | - |
| Coils | Coil | Coil | 536 | 563 | - | - |
| Coils | Coil | Coil | 651 | 743 | - | - |
| Coils | Coil | Coil | 62 | 89 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042915868.1 | uncharacterized protein CHLRE_16g670850v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3R8M1 | USP domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS20406 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg18652, jg25786, jg25787 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_13754 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah001005 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g115420 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30417, Sbi_jg58832 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28701 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00015055 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl51123, Sgl51124, Sgl56431, Sgl56432 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000004421, gene:ENSEOMG00000006413 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0021470, CQ.Regalona.r1.5BG0022850 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30137910 |
| Apiaceae | Apium graveolens | 4 | Ag10G00103, Ag5G00278, Ag5G00635, Ag9G00633 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G002340, COCNU_08G000470 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103721233 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_08.943.V1.1, AsparagusV1_Unassigned.266.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G00560 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G47890.1, AT3G47910.2 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10010059m.g.v1.0, Thhalv10010060m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g14040.v2.2, Sp5g14050.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB05g052230.2N, BniB06g024250.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1836 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2014 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g04470 |
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0131s00009.v1.0, Dusal.0131s00011.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g37010 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.868 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019078 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G26347 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4872, BH01.4800, CH01.5445 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0234970, gene-QOZ80_3BG0293150 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0402810.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_070520, gene-QYE76_070524 |
| Poaceae | Oryza coarctata | 2 | Oco05G003790, Oco06G003840 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g06950.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G469700 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0101245, Pt_Chr0101253, Pt_Chr0500767 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G036440, Chr04G003410, Chr07G007770, Chr12G003010 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G472500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG003110, gene_TRIDC4BG048540 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G022000.2, TraesCS4B02G281400.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb005070_P001, Zm00001eb403430_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-2811, nbis-gene-4394 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2004, Zma_g4353 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.2591, evm.TU.LG02.846, evm.TU.LG09.2020 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g10600, gene.Posoc04g09070 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.940, evm.TU.Scaffold_4_RagTag.536 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14623, nbisL1-mrna-28830 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15552, nbisL1-mrna-20350 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12513, nbisL1-mrna-1803, nbisL1-mrna-1804 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000008l.344, evm.TU.utg000010l.57 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00000617, Maker00008576 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-14561, nbisL1-mrna-803 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-1515, nbisL1-mrna-8584 |
| Salicaceae | Populus euphratica | 4 | populus_peu00641, populus_peu28544, populus_peu28545 ... |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132600999, gene-LOC132631403, gene-LOC132632685 |
| Solanaceae | Solanum chilense | 2 | SOLCI000687300, SOLCI004957800 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107012282, gene-LOC107023109 |
| Tamaricaceae | Reaumuria soongarica | 3 | MSTRG.12655_chr07_+, gene_12607, gene_15318 |
| Tamaricaceae | Tamarix chinensis | 2 | TC05G0076, TC09G1527 |
| Zosteraceae | Zostera marina | 1 | Zosma06g10440.v3.1 |