Basic Information
Locus ID:
Dusal.0318s00007.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Polycomb group protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold318 | 232505 | 256004 | - | Dusal.0318s00007.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 42,650.47 Da | 47.94 | 87.97 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 106 | 143 | 3.9E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 157 | 189 | 0.018 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 16 | 369 | 1.37E-43 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 4 | 369 | 8.1E-94 | IPR015943 |
| SMART | SM00320 | WD40_4 | 216 | 253 | 61.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 327 | 368 | 2.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 103 | 143 | 2.4E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3 | 49 | 19.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 146 | 189 | 1.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 281 | 322 | 0.82 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 110 | 146 | 12.079106 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 156 | 198 | 10.441614 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 110 | 146 | 10.07378 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044422620.1 | polycomb group protein FIE1-like [Triticum aestivum] | 0 |
| Q8VZY6 | Polycomb group protein FIE2 OS=Zea mays OX=4577 GN=FIE2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A250XB15 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g7709.t1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg21474 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_12347 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg18842, Sbi_jg37279 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5097 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007038 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl22862, Sgl23718, Sgl27980, Sgl28913 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009891, gene:ENSEOMG00000027073 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0021380, CQ.Regalona.r1.4AG0021390 ... |
| Apiaceae | Apium graveolens | 4 | Ag11G04800, Ag11G04801, Ag2G00494, Ag4G02685 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103699671 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.2610.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G24904 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G20740.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10020971m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g18760.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g042970.2N, BniB01g042990.2N, BniB07g050410.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1236 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1374 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g06690 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0318s00007.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g17290 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1789 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00001644, Pov_00008915 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G02551, Lb5G26691 |
| Poaceae | Echinochloa crus-galli | 8 | AH01.966, AH08.265, AH08.722, BH01.1105, BH08.251, CH01.1152 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_8AG0616580, gene-QOZ80_8BG0644110 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0702190.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_033153 |
| Poaceae | Oryza coarctata | 3 | Oco15G001590, Oco16G001690, Oco16G001710 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g04270.1, LOC_Os08g04290.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_07G035300, gene-BS78_08G028100, gene-BS78_K080200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0402516, Pt_Chr0404331, Pt_Chr0404333 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr16G000880, Chr17G000840, Chr20G013120, Chr20G013360 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G187900, Tel7E01G518600 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC4AG058500, gene_TRIDC7AG010170 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS4A02G388400.1, TraesCS7A02G089100.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb173090_P001, Zm00001eb416950_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-39152, nbis-gene-41514, nbis-gene-51560 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g18840, Zma_g23578 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1659, evm.TU.LG09.257 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc08g08020 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.430 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-11036, nbisL1-mrna-11057 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16495 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10397 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000006l.471 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013525 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13301 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23580 |
| Salicaceae | Populus euphratica | 2 | populus_peu00379, populus_peu37315 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132617017, gene-LOC132618128, gene-LOC132635324 |
| Solanaceae | Solanum chilense | 1 | SOLCI000270500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107024120 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_298 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G0927 |
| Zosteraceae | Zostera marina | 1 | Zosma05g17550.v3.1 |