Basic Information
Locus ID:
Dusal.0313s00016.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold313 | 326235 | 337051 | + | Dusal.0313s00016.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.99 | 68,201.74 Da | 59.18 | 62.32 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00201 | WW | 12 | 40 | 7.77788E-5 | IPR001202 |
| CDD | cd18787 | SF2_C_DEAD | 360 | 489 | 1.05815E-57 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 373 | 480 | 4.8E-33 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 163 | 332 | 1.3E-48 | IPR011545 |
| Pfam | PF00397 | WW domain | 12 | 41 | 7.8E-7 | IPR001202 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 211 | 497 | 3.4E-71 | IPR027417 |
| SUPERFAMILY | SSF51045 | WW domain | 7 | 42 | 2.54E-7 | IPR036020 |
| Gene3D | G3DSA:2.20.70.10 | - | 7 | 51 | 5.8E-7 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 350 | 520 | 2.8E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 120 | 349 | 1.0E-79 | IPR027417 |
| SMART | SM00487 | ultradead3 | 158 | 363 | 3.3E-60 | IPR014001 |
| SMART | SM00490 | helicmild6 | 400 | 480 | 5.9E-33 | IPR001650 |
| SMART | SM00456 | ww_5 | 10 | 43 | 8.8E-6 | IPR001202 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 373 | 519 | 25.392357 | IPR001650 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 139 | 167 | 11.568432 | IPR014014 |
| ProSiteProfiles | PS50020 | WW/rsp5/WWP domain profile. | 9 | 43 | 11.4475 | IPR001202 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 170 | 344 | 29.735952 | IPR014001 |
| ProSitePatterns | PS01159 | WW/rsp5/WWP domain signature. | 15 | 41 | - | IPR001202 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 290 | 298 | - | IPR000629 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 601 | - | - |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01540.1 | DEAD box RNA helicase 1. RNA HELICASE DRH1 | 0 |
| RefSeq | XP_002952040.1 | hypothetical protein VOLCADRAFT_81727 [Volvox carteri f. nagariensis] | 0 |
| Q8H136 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7S3QQG2 | DEAD-box ATP-dependent RNA helicase 14 (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS5097 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology