Basic Information
Locus ID:
Dusal.0307s00019.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold307 | 265166 | 278204 | - | Dusal.0307s00019.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 41,867.87 Da | 35.60 | 92.95 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 89 | 375 | 3.49618E-48 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 101 | 134 | 3.0E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 245 | 279 | 0.0061 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 325 | 363 | 1.6E-9 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 284 | 321 | 3.9E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 88 | 368 | 2.11E-46 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 238 | 384 | 2.3E-43 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 85 | 162 | 2.9E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 324 | 363 | 5.7E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 239 | 279 | 2.4E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 137 | 190 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 95 | 134 | 2.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 282 | 321 | 3.0E-9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 289 | 326 | 12.604675 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 247 | 283 | 9.309238 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 289 | 330 | 16.289801 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 247 | 288 | 11.811761 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 102 | 143 | 16.022453 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 331 | 372 | 13.983944 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 331 | 363 | 11.418318 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 102 | 139 | 11.998316 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 308 | 322 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 121 | 135 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 350 | 364 | 2.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 308 | 322 | 2.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 121 | 135 | 2.9E-6 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042924974.1 | uncharacterized protein CHLRE_04g216902v5 [Chlamydomonas reinhardtii] | 0 |
| Q3Y8L7 | Dynein assembly factor with WD repeat domains 1 OS=Chlamydomonas reinhardtii OX=3055 GN=DAW1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S3VIG1 | WD_REPEATS_REGION domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS2633 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Dusal.0307s00019.v1.0.