Basic Information
Locus ID:
Dusal.0285s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
HELP motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold285 | 274086 | 282383 | - | Dusal.0285s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 36,396.22 Da | 46.02 | 77.84 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 152 | 184 | 0.0045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 54 | 86 | 0.096 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 3 | 274 | 3.3E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 20 | 156 | 2.1E-36 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 157 | 275 | 2.1E-36 | IPR015943 |
| SMART | SM00320 | WD40_4 | 45 | 86 | 0.25 | IPR001680 |
| SMART | SM00320 | WD40_4 | 143 | 184 | 8.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 235 | 274 | 2.4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 151 | 184 | 9.651964 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 151 | 193 | 12.145943 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 61 | 95 | 9.071468 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042918795.1 | uncharacterized protein CHLRE_12g538850v5 [Chlamydomonas reinhardtii] | 0 |
| TrEMBL | A0A7S3QZ06 | EF-hand domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS12453 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0035s00014.v1.0, Dusal.0041s00007.v1.0 ... |