Basic Information
Locus ID:
Dusal.0284s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold284 | 9252 | 54733 | - | Dusal.0284s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 144,154.47 Da | 38.59 | 74.72 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 457 | 493 | 6.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 341 | 371 | 0.0099 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 548 | 578 | 0.092 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 313 | 582 | 4.66E-40 | IPR036322 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 22 | 405 | 1.77E-24 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 16 | 283 | 2.9E-28 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 297 | 533 | 1.1E-40 | IPR015943 |
| SMART | SM00320 | WD40_4 | 540 | 579 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 333 | 371 | 3.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 416 | 452 | 340.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 455 | 494 | 2.2E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 499 | 536 | 23.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 376 | 411 | 29.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 462 | 503 | 13.616343 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 462 | 496 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 339 | 380 | 10.241105 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 547 | 588 | 8.536777 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1279 | 1311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1256 | 1274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1043 | 1113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1224 | 1245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1135 | 1335 | - | - |
| Coils | Coil | Coil | 602 | 629 | - | - |
| Coils | Coil | Coil | 873 | 918 | - | - |
| Coils | Coil | Coil | 710 | 773 | - | - |
| Coils | Coil | Coil | 681 | 705 | - | - |
| Coils | Coil | Coil | 796 | 851 | - | - |
| Coils | Coil | Coil | 948 | 968 | - | - |
| Coils | Coil | Coil | 1025 | 1045 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042925005.1 | uncharacterized protein CHLRE_04g217914v5 [Chlamydomonas reinhardtii] | 0 |
| Q96MR6 | Cilia- and flagella-associated protein 57 OS=Homo sapiens OX=9606 GN=CFAP57 PE=1 SV=3 | 0 | |
| TrEMBL | A0A250X9A0 | WD_REPEATS_REGION domain-containing protein OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g7095.t1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0062s00013.v1.0, Dusal.0076s00003.v1.0 ... |