Basic Information
Locus ID:
Dusal.0276s00005.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
MYND finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold276 | 47345 | 59198 | - | Dusal.0276s00005.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 29,908.68 Da | 44.01 | 68.15 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 2 | 91 | 1.1E-14 | IPR020683 |
| Pfam | PF01753 | MYND finger | 240 | 278 | 4.1E-7 | IPR002893 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 1 | 120 | 2.33E-28 | IPR036770 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 236 | 281 | 1.59E-9 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 1 | 65 | 1.5E-14 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 66 | 116 | 3.1E-14 | IPR036770 |
| Gene3D | G3DSA:6.10.140.2220 | - | 227 | 285 | 1.2E-10 | - |
| SMART | SM00248 | ANK_2a | 1 | 23 | 2700.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 28 | 57 | 0.61 | IPR002110 |
| SMART | SM00248 | ANK_2a | 61 | 90 | 0.0015 | IPR002110 |
| SMART | SM00248 | ANK_2a | 94 | 123 | 120.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 1 | 26 | 9.00344 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 1 | 22 | 8.932349 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 61 | 91 | 10.922203 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 240 | 278 | 10.660679 | IPR002893 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 61 | 93 | 12.20864 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 146 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7S3QZ97 | MYND-type domain-containing protein OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS12438 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 11 | Dusal.0005s00050.v1.0, Dusal.0043s00004.v1.0 ... |