Basic Information
Locus ID:
Dusal.0268s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold268 | 305311 | 316567 | + | Dusal.0268s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 72,651.22 Da | 61.52 | 61.31 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 653 | 705 | 5.54E-12 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 646 | 707 | 1.6E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 659 | 704 | 7.6E-7 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 657 | 706 | 9.1429 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 650 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 599 | - | - |
| Coils | Coil | Coil | 15 | 35 | - | - |
| Coils | Coil | Coil | 87 | 107 | - | - |
| Coils | Coil | Coil | 187 | 207 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_013892399.1 | hypothetical protein MNEG_14583, partial [Monoraphidium neglectum] | 0 |
| TrEMBL | A0A7S3VUK0 | PHD-type domain-containing protein (Fragment) OS=Dunaliella tertiolecta OX=3047 GN=DTER00134_LOCUS21670 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology