Basic Information
Locus ID:
Dusal.0264s00001.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
hematopoietic progenitor cell differentiation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold264 | 6600 | 17518 | + | Dusal.0264s00001.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 56,517.68 Da | 38.80 | 71.03 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13676 | TIR domain | 40 | 131 | 1.3E-9 | IPR000157 |
| Pfam | PF13229 | Right handed beta helix region | 366 | 507 | 2.2E-7 | IPR039448 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 33 | 110 | 4.05E-8 | IPR035897 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | 301 | 479 | 1.37E-9 | IPR011050 |
| Gene3D | G3DSA:3.40.50.10140 | - | 20 | 155 | 5.1E-11 | IPR035897 |
| Gene3D | G3DSA:2.160.20.20 | - | 275 | 534 | 6.2E-10 | IPR012332 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A7R9VEH2 | TIR domain-containing protein OS=Chlamydomonas euryale OX=1486919 GN=CEUR00632_LOCUS11023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 31 | Dusal.0010s00020.v1.0, Dusal.0032s00028.v1.0 ... |
| Poaceae | Echinochloa crus-galli | 1 | CH05.4259 |